PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.FT3VE
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 550aa    MW: 59278.5 Da    PI: 8.8309
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.FT3VEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.3e-09200245144
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 
                      r++W++eEd +l  av+++G g+W+  a+  +   +R++ q+  rw
      Aradu.FT3VE 200 RKAWSEEEDIQLRAAVQRFGEGNWANMAKGDNfpIKRSPTQLAQRW 245
                      789*************************987788569999999999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.183195253IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.7E-12197250IPR009057Homeodomain-like
SuperFamilySSF466897.9E-11198251IPR009057Homeodomain-like
SMARTSM007172.6E-10199251IPR001005SANT/Myb domain
PfamPF002491.2E-8200245IPR001005SANT/Myb domain
CDDcd116601.78E-12201250No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MPEKSRKVPF TEQDSAKLLE RYDATTVLTL LQELAHYPHA KIDWNELVKN TSTGISTARE  60
YQMVWRHLAY RHALAENLED GAQPLDDDSD LECELEVSPP VSAEAVSEAA ACMKVMIASR  120
TLSESTPSSS TIEAPLTITV PVCRGSGTPS GSSQSSKLMQ GTNVIFPVTV QRQTLPTAPS  180
TDGVETKGLG GGNMASKRKR KAWSEEEDIQ LRAAVQRFGE GNWANMAKGD NFPIKRSPTQ  240
LAQRWSILRK KDGTANSGTI VTSTTYTTAE QLATRHSLSL ALDMPFKKLT APGTADQAKT  300
SLTSKTQVQH TTTATTIQSS LPPHQQSMLR GNPTPNPALK ATAVAQVRNA VPGTSISLAK  360
PSTSAGMSSE SEVQARTSSS VAHVPPQSVR IPSQSAPAPS QSTAPITSPL SCSSTVKAAS  420
STVPVLPEKD KPVTPTLVVN KVPIKQEVNT TDELRNSKPS PAPKEMVQND EKSTQDKSMN  480
IPVRERVTSL VGSTRKEEVA EDKAVPKNQV KSEDDGNKGS HELDKEKSKI SINGRSQDQK  540
MDEKQENLQN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150357e-36AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934883.10.0PREDICTED: flocculation protein FLO11-like
TrEMBLK7KJ580.0K7KJ58_SOYBN; Uncharacterized protein
TrEMBLK7KJ560.0K7KJ56_SOYBN; Uncharacterized protein
STRINGGLYMA06G10170.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.12e-52MYB_related family protein